Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN3P51790 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCN3P51790 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN3P51790 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.9■□□□□ 0.46
CLCN3P51790 AF228730.6-201ENST00000641497 218 ntBASIC17.9■□□□□ 0.46
CLCN3P51790 AC084121.3-201ENST00000641716 218 ntBASIC17.9■□□□□ 0.46
CLCN3P51790 AC105233.6-201ENST00000642093 218 ntBASIC17.9■□□□□ 0.46
CLCN3P51790 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.9■□□□□ 0.46
CLCN3P51790 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.9■□□□□ 0.46
CLCN3P51790 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLCN3P51790 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.89■□□□□ 0.46
CLCN3P51790 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.89■□□□□ 0.46
CLCN3P51790 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLCN3P51790 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLCN3P51790 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCN3P51790 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 SPTLC1P1-201ENST00000447199 261 ntBASIC17.89■□□□□ 0.45
CLCN3P51790 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCN3P51790 AL139010.1-201ENST00000454878 894 ntBASIC17.89■□□□□ 0.45
CLCN3P51790 POU5F1P6-201ENST00000466990 990 ntBASIC17.89■□□□□ 0.45
CLCN3P51790 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCN3P51790 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCN3P51790 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.89■□□□□ 0.45
CLCN3P51790 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCN3P51790 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCN3P51790 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 KRT8P12-202ENST00000472924 1397 ntBASIC17.89■□□□□ 0.45
CLCN3P51790 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLCN3P51790 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 AL136982.4-201ENST00000437689 1740 ntBASIC17.89■□□□□ 0.45
CLCN3P51790 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN3P51790 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLCN3P51790 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLCN3P51790 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCN3P51790 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN3P51790 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLCN3P51790 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN3P51790 AC009053.2-201ENST00000563701 2365 ntBASIC17.88■□□□□ 0.45
CLCN3P51790 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLCN3P51790 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLCN3P51790 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 SPDYE17-201ENST00000412399 783 ntBASIC17.88■□□□□ 0.45
CLCN3P51790 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.88■□□□□ 0.45
CLCN3P51790 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 AC044860.1-202ENST00000559481 777 ntBASIC17.88■□□□□ 0.45
CLCN3P51790 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.88■□□□□ 0.45
CLCN3P51790 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN3P51790 AL365330.1-201ENST00000607459 531 ntBASIC17.88■□□□□ 0.45
CLCN3P51790 AC004233.3-201ENST00000607794 1269 ntBASIC17.88■□□□□ 0.45
CLCN3P51790 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN3P51790 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN3P51790 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN3P51790 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLCN3P51790 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN3P51790 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLCN3P51790 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms