Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NCAPD3P42695 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCAPD3P42695 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCAPD3P42695 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC28.24■■■□□ 2.11
NCAPD3P42695 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCAPD3P42695 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
NCAPD3P42695 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC28.24■■■□□ 2.11
NCAPD3P42695 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC28.24■■■□□ 2.11
NCAPD3P42695 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC28.24■■■□□ 2.11
NCAPD3P42695 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCAPD3P42695 LETM1P2-201ENST00000597330 2178 ntBASIC28.23■■■□□ 2.11
NCAPD3P42695 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC28.23■■■□□ 2.11
NCAPD3P42695 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
NCAPD3P42695 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 RNA5SP486-201ENST00000515961 83 ntBASIC28.23■■■□□ 2.11
NCAPD3P42695 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC28.23■■■□□ 2.11
NCAPD3P42695 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
NCAPD3P42695 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC28.23■■■□□ 2.11
NCAPD3P42695 AP001505.2-201ENST00000616815 443 ntBASIC28.23■■■□□ 2.11
NCAPD3P42695 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC28.23■■■□□ 2.11
NCAPD3P42695 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
NCAPD3P42695 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
NCAPD3P42695 PXK-206ENST00000463280 2825 ntTSL 2 BASIC28.23■■■□□ 2.11
NCAPD3P42695 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC28.22■■■□□ 2.11
NCAPD3P42695 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 HLA-DQB2-229ENST00000411527 1059 ntBASIC28.22■■■□□ 2.11
NCAPD3P42695 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC28.22■■■□□ 2.11
NCAPD3P42695 KLK3-207ENST00000595952 969 ntTSL 3 BASIC28.22■■■□□ 2.11
NCAPD3P42695 AP005019.2-201ENST00000615104 511 ntBASIC28.22■■■□□ 2.11
NCAPD3P42695 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC28.22■■■□□ 2.11
NCAPD3P42695 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC28.22■■■□□ 2.11
NCAPD3P42695 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
NCAPD3P42695 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC28.21■■■□□ 2.11
NCAPD3P42695 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC28.21■■■□□ 2.11
NCAPD3P42695 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC28.21■■■□□ 2.11
NCAPD3P42695 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC28.21■■■□□ 2.11
NCAPD3P42695 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
NCAPD3P42695 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC28.21■■■□□ 2.11
NCAPD3P42695 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NCAPD3P42695 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
NCAPD3P42695 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC28.21■■■□□ 2.11
NCAPD3P42695 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC28.21■■■□□ 2.11
NCAPD3P42695 CYP46A4P-201ENST00000414953 267 ntBASIC28.21■■■□□ 2.11
NCAPD3P42695 MAGEA5-201ENST00000446757 942 ntBASIC28.21■■■□□ 2.11
NCAPD3P42695 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC28.21■■■□□ 2.11
NCAPD3P42695 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC28.21■■■□□ 2.11
NCAPD3P42695 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC28.21■■■□□ 2.11
NCAPD3P42695 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC28.21■■■□□ 2.11
NCAPD3P42695 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC28.2■■■□□ 2.11
NCAPD3P42695 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
NCAPD3P42695 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
NCAPD3P42695 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
NCAPD3P42695 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
NCAPD3P42695 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC28.2■■■□□ 2.1
NCAPD3P42695 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
NCAPD3P42695 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC28.2■■■□□ 2.1
NCAPD3P42695 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC28.2■■■□□ 2.1
NCAPD3P42695 SDHD-202ENST00000525291 790 ntTSL 3 BASIC28.2■■■□□ 2.1
NCAPD3P42695 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC28.2■■■□□ 2.1
NCAPD3P42695 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC28.2■■■□□ 2.1
NCAPD3P42695 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.1
NCAPD3P42695 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
NCAPD3P42695 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms