Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CEACAM3P40198 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CEACAM3P40198 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
CEACAM3P40198 AC026120.1-201ENST00000611536 926 ntBASIC13.4□□□□□ -0.26
CEACAM3P40198 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.4□□□□□ -0.26
CEACAM3P40198 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CEACAM3P40198 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 ELL2P1-201ENST00000413990 1906 ntBASIC13.4□□□□□ -0.26
CEACAM3P40198 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.4□□□□□ -0.26
CEACAM3P40198 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.4□□□□□ -0.26
CEACAM3P40198 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 AC103702.1-201ENST00000548801 2630 ntBASIC13.4□□□□□ -0.26
CEACAM3P40198 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CEACAM3P40198 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CEACAM3P40198 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AL118508.1-201ENST00000613502 2345 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 TFAMP1-201ENST00000412727 736 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.39□□□□□ -0.27
CEACAM3P40198 GPX1P2-201ENST00000429271 606 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.39□□□□□ -0.27
CEACAM3P40198 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AC010327.4-202ENST00000591484 748 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
CEACAM3P40198 AC092902.6-201ENST00000641783 218 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 AC079781.4-201ENST00000641908 219 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
CEACAM3P40198 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CEACAM3P40198 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 UBALD1-205ENST00000590891 2641 ntBASIC13.39□□□□□ -0.27
CEACAM3P40198 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CEACAM3P40198 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.39□□□□□ -0.27
CEACAM3P40198 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CEACAM3P40198 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CEACAM3P40198 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.38□□□□□ -0.27
CEACAM3P40198 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 IGHV3-62-201ENST00000520057 340 ntBASIC13.38□□□□□ -0.27
CEACAM3P40198 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.38□□□□□ -0.27
CEACAM3P40198 AL135744.1-201ENST00000565098 629 ntBASIC13.38□□□□□ -0.27
CEACAM3P40198 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.38□□□□□ -0.27
CEACAM3P40198 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CEACAM3P40198 AC099522.2-201ENST00000607001 744 ntBASIC13.38□□□□□ -0.27
CEACAM3P40198 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CEACAM3P40198 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.38□□□□□ -0.27
CEACAM3P40198 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms