Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
RFC1P35251 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFC1P35251 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RFC1P35251 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
RFC1P35251 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
RFC1P35251 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RFC1P35251 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 AP000347.1-202ENST00000435868 847 ntBASIC17.28■□□□□ 0.36
RFC1P35251 POLD2P1-201ENST00000511220 997 ntBASIC17.28■□□□□ 0.36
RFC1P35251 PGAM5P1-201ENST00000518923 814 ntBASIC17.28■□□□□ 0.36
RFC1P35251 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.28■□□□□ 0.36
RFC1P35251 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 KRT18P58-201ENST00000527480 1120 ntBASIC17.28■□□□□ 0.36
RFC1P35251 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFC1P35251 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.28■□□□□ 0.36
RFC1P35251 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 AL671883.3-201ENST00000603274 991 ntBASIC17.28■□□□□ 0.36
RFC1P35251 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.28■□□□□ 0.36
RFC1P35251 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFC1P35251 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFC1P35251 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.27■□□□□ 0.36
RFC1P35251 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RFC1P35251 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.27■□□□□ 0.36
RFC1P35251 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.27■□□□□ 0.36
RFC1P35251 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.27■□□□□ 0.36
RFC1P35251 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.27■□□□□ 0.36
RFC1P35251 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.27■□□□□ 0.36
RFC1P35251 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFC1P35251 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
RFC1P35251 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.27■□□□□ 0.35
RFC1P35251 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.27■□□□□ 0.35
RFC1P35251 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.27■□□□□ 0.35
RFC1P35251 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFC1P35251 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RFC1P35251 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.27■□□□□ 0.35
RFC1P35251 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 KRT18P34-201ENST00000488218 1270 ntBASIC17.26■□□□□ 0.35
RFC1P35251 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 AC099522.2-201ENST00000607001 744 ntBASIC17.26■□□□□ 0.35
RFC1P35251 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
RFC1P35251 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms