Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.15■□□□□ 0.5
CTGFP29279 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.15■□□□□ 0.5
CTGFP29279 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.15■□□□□ 0.5
CTGFP29279 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTGFP29279 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.15■□□□□ 0.5
CTGFP29279 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTGFP29279 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.14■□□□□ 0.5
CTGFP29279 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTGFP29279 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTGFP29279 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.14■□□□□ 0.5
CTGFP29279 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTGFP29279 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 REXO1L8P-201ENST00000604378 1897 ntBASIC18.14■□□□□ 0.49
CTGFP29279 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CTGFP29279 CNN2P8-201ENST00000421872 913 ntBASIC18.14■□□□□ 0.49
CTGFP29279 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.14■□□□□ 0.49
CTGFP29279 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.14■□□□□ 0.49
CTGFP29279 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.14■□□□□ 0.49
CTGFP29279 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CTGFP29279 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.14■□□□□ 0.49
CTGFP29279 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 AC079328.1-201ENST00000560358 952 ntBASIC18.14■□□□□ 0.49
CTGFP29279 AP001063.1-201ENST00000568332 529 ntBASIC18.14■□□□□ 0.49
CTGFP29279 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 AL022328.3-201ENST00000607943 679 ntBASIC18.14■□□□□ 0.49
CTGFP29279 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTGFP29279 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.14■□□□□ 0.49
CTGFP29279 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTGFP29279 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.13■□□□□ 0.49
CTGFP29279 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.13■□□□□ 0.49
CTGFP29279 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.13■□□□□ 0.49
CTGFP29279 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 AP002490.2-201ENST00000524791 560 ntBASIC18.13■□□□□ 0.49
CTGFP29279 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.13■□□□□ 0.49
CTGFP29279 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.13■□□□□ 0.49
CTGFP29279 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.13■□□□□ 0.49
CTGFP29279 AC016629.1-201ENST00000596579 586 ntBASIC18.13■□□□□ 0.49
CTGFP29279 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.13■□□□□ 0.49
CTGFP29279 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.13■□□□□ 0.49
CTGFP29279 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.13■□□□□ 0.49
CTGFP29279 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.13■□□□□ 0.49
CTGFP29279 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTGFP29279 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.13■□□□□ 0.49
CTGFP29279 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.12■□□□□ 0.49
CTGFP29279 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CTGFP29279 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTGFP29279 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.12■□□□□ 0.49
CTGFP29279 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTGFP29279 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.12■□□□□ 0.49
CTGFP29279 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms