Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD40P25942 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD40P25942 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD40P25942 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CD40P25942 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD40P25942 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD40P25942 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40P25942 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.08□□□□□ -0.16
CD40P25942 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CD40P25942 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.08□□□□□ -0.16
CD40P25942 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 POU5F1P6-201ENST00000466990 990 ntBASIC14.08□□□□□ -0.16
CD40P25942 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.08□□□□□ -0.16
CD40P25942 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.08□□□□□ -0.16
CD40P25942 BANF1P1-201ENST00000553684 263 ntBASIC14.08□□□□□ -0.16
CD40P25942 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.08□□□□□ -0.16
CD40P25942 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.08□□□□□ -0.16
CD40P25942 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CD40P25942 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.08□□□□□ -0.16
CD40P25942 AC026979.3-201ENST00000607315 403 ntBASIC14.08□□□□□ -0.16
CD40P25942 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40P25942 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CD40P25942 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.08□□□□□ -0.16
CD40P25942 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.08□□□□□ -0.16
CD40P25942 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD40P25942 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CD40P25942 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40P25942 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.07□□□□□ -0.16
CD40P25942 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40P25942 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 TSPY16P-201ENST00000449843 468 ntBASIC14.07□□□□□ -0.16
CD40P25942 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.07□□□□□ -0.16
CD40P25942 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40P25942 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.07□□□□□ -0.16
CD40P25942 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 AL365330.1-201ENST00000607459 531 ntBASIC14.07□□□□□ -0.16
CD40P25942 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CD40P25942 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.07□□□□□ -0.16
CD40P25942 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
CD40P25942 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CD40P25942 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms