Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MMP8P22894 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP8P22894 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP8P22894 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP8P22894 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP8P22894 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP8P22894 AC142381.1-201ENST00000426099 345 ntBASIC17.18■□□□□ 0.34
MMP8P22894 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.18■□□□□ 0.34
MMP8P22894 ALG1L5P-201ENST00000482043 771 ntBASIC17.18■□□□□ 0.34
MMP8P22894 KRT8P48-201ENST00000515599 1220 ntBASIC17.18■□□□□ 0.34
MMP8P22894 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.18■□□□□ 0.34
MMP8P22894 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
MMP8P22894 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP8P22894 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP8P22894 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 MIR346-201ENST00000362234 95 ntBASIC17.17■□□□□ 0.34
MMP8P22894 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 SPCS2P4-201ENST00000436160 681 ntBASIC17.17■□□□□ 0.34
MMP8P22894 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP8P22894 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 AC079140.1-201ENST00000508039 487 ntBASIC17.17■□□□□ 0.34
MMP8P22894 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP8P22894 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 SPTSSB-204ENST00000617024 1292 ntBASIC17.17■□□□□ 0.34
MMP8P22894 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.17■□□□□ 0.34
MMP8P22894 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP8P22894 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
MMP8P22894 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 HAUS4P1-201ENST00000406739 1145 ntBASIC17.16■□□□□ 0.34
MMP8P22894 GPX1P2-201ENST00000429271 606 ntBASIC17.16■□□□□ 0.34
MMP8P22894 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 SPDYE11-202ENST00000450699 704 ntBASIC17.16■□□□□ 0.34
MMP8P22894 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP8P22894 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.16■□□□□ 0.34
MMP8P22894 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP8P22894 SPDYE9P-201ENST00000570642 692 ntBASIC17.16■□□□□ 0.34
MMP8P22894 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms