Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.83■□□□□ 0.44
RFX1P22670 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.83■□□□□ 0.44
RFX1P22670 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 AC105339.1-204ENST00000636249 355 ntBASIC17.83■□□□□ 0.44
RFX1P22670 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RFX1P22670 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RFX1P22670 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.83■□□□□ 0.44
RFX1P22670 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFX1P22670 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFX1P22670 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFX1P22670 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.83■□□□□ 0.44
RFX1P22670 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 AC063926.2-201ENST00000623766 1308 ntBASIC17.82■□□□□ 0.44
RFX1P22670 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.82■□□□□ 0.44
RFX1P22670 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 AL513480.1-201ENST00000451731 511 ntBASIC17.82■□□□□ 0.44
RFX1P22670 TIMM8BP1-201ENST00000452384 211 ntBASIC17.82■□□□□ 0.44
RFX1P22670 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 AJ011932.1-201ENST00000621707 465 ntBASIC17.82■□□□□ 0.44
RFX1P22670 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.82■□□□□ 0.44
RFX1P22670 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.82■□□□□ 0.44
RFX1P22670 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RFX1P22670 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFX1P22670 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX1P22670 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX1P22670 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.81■□□□□ 0.44
RFX1P22670 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX1P22670 RHOQP3-201ENST00000437982 621 ntBASIC17.81■□□□□ 0.44
RFX1P22670 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 AC112191.1-201ENST00000523689 701 ntBASIC17.81■□□□□ 0.44
RFX1P22670 AC109322.1-201ENST00000524499 1264 ntBASIC17.81■□□□□ 0.44
RFX1P22670 AC109635.5-201ENST00000533593 962 ntBASIC17.81■□□□□ 0.44
RFX1P22670 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.81■□□□□ 0.44
RFX1P22670 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.81■□□□□ 0.44
RFX1P22670 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.81■□□□□ 0.44
RFX1P22670 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX1P22670 AC092902.6-201ENST00000641783 218 ntBASIC17.81■□□□□ 0.44
RFX1P22670 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms