Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
CAPN2P17655 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN2P17655 AC009949.1-201ENST00000623048 1830 ntBASIC18.9■□□□□ 0.62
CAPN2P17655 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN2P17655 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CAPN2P17655 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN2P17655 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.9■□□□□ 0.62
CAPN2P17655 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN2P17655 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN2P17655 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN2P17655 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.9■□□□□ 0.62
CAPN2P17655 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CAPN2P17655 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN2P17655 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CAPN2P17655 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.9■□□□□ 0.62
CAPN2P17655 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CAPN2P17655 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.9■□□□□ 0.62
CAPN2P17655 FLJ13224-201ENST00000313737 1514 ntBASIC18.9■□□□□ 0.62
CAPN2P17655 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.89■□□□□ 0.62
CAPN2P17655 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.89■□□□□ 0.62
CAPN2P17655 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CAPN2P17655 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CAPN2P17655 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CAPN2P17655 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 AL512384.1-201ENST00000406683 331 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.89■□□□□ 0.61
CAPN2P17655 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CAPN2P17655 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CAPN2P17655 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN2P17655 ZNF890P-202ENST00000530367 1156 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 HILS1-202ENST00000545329 423 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.89■□□□□ 0.61
CAPN2P17655 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CAPN2P17655 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CAPN2P17655 RARRES2P9-201ENST00000565168 469 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 AC084346.2-201ENST00000607097 949 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 AL138828.2-201ENST00000615812 383 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.89■□□□□ 0.61
CAPN2P17655 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
CAPN2P17655 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.89■□□□□ 0.61
CAPN2P17655 AC007541.1-201ENST00000570282 1469 ntBASIC18.89■□□□□ 0.61
CAPN2P17655 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN2P17655 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN2P17655 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CAPN2P17655 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN2P17655 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN2P17655 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN2P17655 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CAPN2P17655 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CAPN2P17655 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN2P17655 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN2P17655 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN2P17655 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.88■□□□□ 0.61
CAPN2P17655 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms