Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 TSEN15P1-201ENST00000423257 515 ntBASIC18.47■□□□□ 0.55
GCFC2P16383 SPDYE14P-201ENST00000442619 822 ntBASIC18.47■□□□□ 0.55
GCFC2P16383 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.47■□□□□ 0.55
GCFC2P16383 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.47■□□□□ 0.55
GCFC2P16383 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.47■□□□□ 0.55
GCFC2P16383 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GCFC2P16383 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GCFC2P16383 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
GCFC2P16383 AC092364.2-201ENST00000596710 2692 ntBASIC18.46■□□□□ 0.55
GCFC2P16383 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 PCDHB19P-201ENST00000570871 2371 ntBASIC18.46■□□□□ 0.55
GCFC2P16383 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GCFC2P16383 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
GCFC2P16383 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.46■□□□□ 0.55
GCFC2P16383 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.46■□□□□ 0.55
GCFC2P16383 AC026150.2-201ENST00000564693 1156 ntBASIC18.46■□□□□ 0.55
GCFC2P16383 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.46■□□□□ 0.55
GCFC2P16383 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GCFC2P16383 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.46■□□□□ 0.55
GCFC2P16383 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GCFC2P16383 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.46■□□□□ 0.54
GCFC2P16383 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.45■□□□□ 0.54
GCFC2P16383 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.45■□□□□ 0.54
GCFC2P16383 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.45■□□□□ 0.54
GCFC2P16383 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.45■□□□□ 0.54
GCFC2P16383 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.45■□□□□ 0.54
GCFC2P16383 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.45■□□□□ 0.54
GCFC2P16383 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
GCFC2P16383 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.45■□□□□ 0.54
GCFC2P16383 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 LINC00628-201ENST00000628516 1289 ntBASIC18.45■□□□□ 0.54
GCFC2P16383 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
GCFC2P16383 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GCFC2P16383 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GCFC2P16383 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms