Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.78■□□□□ 0.6
BMP3P12645 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.78■□□□□ 0.6
BMP3P12645 AC005052.1-201ENST00000625181 2492 ntBASIC18.78■□□□□ 0.6
BMP3P12645 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
BMP3P12645 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BMP3P12645 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BMP3P12645 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BMP3P12645 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 ALOX12P2-203ENST00000570921 1945 ntBASIC18.77■□□□□ 0.6
BMP3P12645 OR6D1P-203ENST00000641209 4860 ntBASIC18.77■□□□□ 0.6
BMP3P12645 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BMP3P12645 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 AC135586.1-201ENST00000539323 574 ntBASIC18.77■□□□□ 0.6
BMP3P12645 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 AC044860.1-202ENST00000559481 777 ntBASIC18.77■□□□□ 0.6
BMP3P12645 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.77■□□□□ 0.6
BMP3P12645 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.77■□□□□ 0.6
BMP3P12645 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 AC011676.5-201ENST00000624864 2660 ntBASIC18.77■□□□□ 0.6
BMP3P12645 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.77■□□□□ 0.6
BMP3P12645 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.77■□□□□ 0.6
BMP3P12645 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BMP3P12645 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BMP3P12645 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BMP3P12645 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.76■□□□□ 0.59
BMP3P12645 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.76■□□□□ 0.59
BMP3P12645 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
BMP3P12645 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.76■□□□□ 0.59
BMP3P12645 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.76■□□□□ 0.59
BMP3P12645 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.76■□□□□ 0.59
BMP3P12645 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.76■□□□□ 0.59
BMP3P12645 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.76■□□□□ 0.59
BMP3P12645 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.76■□□□□ 0.59
BMP3P12645 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.76■□□□□ 0.59
BMP3P12645 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.76■□□□□ 0.59
BMP3P12645 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BMP3P12645 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.76■□□□□ 0.59
BMP3P12645 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BMP3P12645 CYP4F24P-201ENST00000586049 1580 ntBASIC18.76■□□□□ 0.59
BMP3P12645 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.75■□□□□ 0.59
BMP3P12645 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BMP3P12645 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
BMP3P12645 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BMP3P12645 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
BMP3P12645 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BMP3P12645 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.75■□□□□ 0.59
BMP3P12645 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BMP3P12645 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BMP3P12645 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms