Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP2P08253 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 KRT18P32-201ENST00000424695 1287 ntBASIC16.43■□□□□ 0.22
MMP2P08253 CNN2P11-201ENST00000429351 262 ntBASIC16.43■□□□□ 0.22
MMP2P08253 AC245100.5-201ENST00000452108 331 ntBASIC16.43■□□□□ 0.22
MMP2P08253 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP2P08253 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP2P08253 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP2P08253 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP2P08253 AL596442.2-201ENST00000610240 980 ntBASIC16.43■□□□□ 0.22
MMP2P08253 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.43■□□□□ 0.22
MMP2P08253 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP2P08253 AC009093.7-201ENST00000623853 1223 ntBASIC16.43■□□□□ 0.22
MMP2P08253 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP2P08253 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP2P08253 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP2P08253 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.43■□□□□ 0.22
MMP2P08253 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MMP2P08253 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 AC010491.1-201ENST00000563101 2797 ntBASIC16.43■□□□□ 0.22
MMP2P08253 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP2P08253 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP2P08253 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
MMP2P08253 AC069224.1-201ENST00000566372 1715 ntBASIC16.42■□□□□ 0.22
MMP2P08253 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.42■□□□□ 0.22
MMP2P08253 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 HLA-H-201ENST00000383620 1096 ntBASIC16.42■□□□□ 0.22
MMP2P08253 RNA5SP410-201ENST00000516285 106 ntBASIC16.42■□□□□ 0.22
MMP2P08253 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ALG1L8P-201ENST00000533887 760 ntBASIC16.42■□□□□ 0.22
MMP2P08253 RARRES2P9-201ENST00000565168 469 ntBASIC16.42■□□□□ 0.22
MMP2P08253 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP2P08253 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP2P08253 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.42■□□□□ 0.22
MMP2P08253 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP2P08253 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MMP2P08253 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP2P08253 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MMP2P08253 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 AL365203.3-201ENST00000609742 2057 ntBASIC16.41■□□□□ 0.22
MMP2P08253 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP2P08253 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
MMP2P08253 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 AC112504.1-201ENST00000623415 1841 ntBASIC16.41■□□□□ 0.22
MMP2P08253 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP2P08253 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
MMP2P08253 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MMP2P08253 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms