Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.48■□□□□ 0.23
RETP07949 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RETP07949 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RETP07949 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RETP07949 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RETP07949 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RETP07949 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RETP07949 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.48■□□□□ 0.23
RETP07949 ZNF890P-202ENST00000530367 1156 ntBASIC16.48■□□□□ 0.23
RETP07949 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.48■□□□□ 0.23
RETP07949 CHCHD2P3-201ENST00000603038 451 ntBASIC16.48■□□□□ 0.23
RETP07949 AC099568.2-201ENST00000609194 695 ntBASIC16.48■□□□□ 0.23
RETP07949 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
RETP07949 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 FLJ38576-201ENST00000623820 2459 ntBASIC16.48■□□□□ 0.23
RETP07949 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
RETP07949 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
RETP07949 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.48■□□□□ 0.23
RETP07949 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RETP07949 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.48■□□□□ 0.23
RETP07949 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.48■□□□□ 0.23
RETP07949 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.47■□□□□ 0.23
RETP07949 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 PKD1P1-201ENST00000458669 6805 ntBASIC16.47■□□□□ 0.23
RETP07949 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.47■□□□□ 0.23
RETP07949 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.47■□□□□ 0.23
RETP07949 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.47■□□□□ 0.23
RETP07949 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.47■□□□□ 0.23
RETP07949 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.47■□□□□ 0.23
RETP07949 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.47■□□□□ 0.23
RETP07949 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.47■□□□□ 0.23
RETP07949 KRT18P34-201ENST00000488218 1270 ntBASIC16.47■□□□□ 0.23
RETP07949 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.47■□□□□ 0.23
RETP07949 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.47■□□□□ 0.23
RETP07949 AP005482.1-201ENST00000563722 1273 ntBASIC16.47■□□□□ 0.23
RETP07949 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.47■□□□□ 0.23
RETP07949 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.47■□□□□ 0.23
RETP07949 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.47■□□□□ 0.23
RETP07949 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.47■□□□□ 0.23
RETP07949 RN7SL828P-201ENST00000607615 303 ntBASIC16.47■□□□□ 0.23
RETP07949 AC021097.1-201ENST00000607902 574 ntBASIC16.47■□□□□ 0.23
RETP07949 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.47■□□□□ 0.23
RETP07949 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RETP07949 LINC02012-201ENST00000608206 1725 ntBASIC16.47■□□□□ 0.23
RETP07949 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.47■□□□□ 0.23
RETP07949 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RETP07949 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RETP07949 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RETP07949 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RETP07949 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RETP07949 SLC22A20-204ENST00000530038 1673 ntBASIC16.46■□□□□ 0.23
RETP07949 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RETP07949 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RETP07949 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms