Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CD74P04233 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 AC233702.3-201ENST00000578656 1387 ntBASIC13.8□□□□□ -0.2
CD74P04233 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CD74P04233 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD74P04233 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CD74P04233 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.8□□□□□ -0.2
CD74P04233 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 AP002414.2-201ENST00000591780 3365 ntBASIC13.79□□□□□ -0.2
CD74P04233 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 SNX18-202ENST00000343017 3140 ntBASIC13.79□□□□□ -0.2
CD74P04233 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 CHCHD2P8-201ENST00000429873 447 ntBASIC13.79□□□□□ -0.2
CD74P04233 MINOS1P3-201ENST00000457048 203 ntBASIC13.79□□□□□ -0.2
CD74P04233 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.79□□□□□ -0.2
CD74P04233 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
CD74P04233 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.79□□□□□ -0.2
CD74P04233 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CD74P04233 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CD74P04233 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 AL353732.1-201ENST00000569618 1459 ntBASIC13.79□□□□□ -0.2
CD74P04233 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
CD74P04233 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD74P04233 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CD74P04233 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.78□□□□□ -0.2
CD74P04233 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.78□□□□□ -0.2
CD74P04233 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 Z69720.1-201ENST00000601483 472 ntBASIC13.78□□□□□ -0.2
CD74P04233 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 AP001350.2-201ENST00000625104 1094 ntBASIC13.78□□□□□ -0.2
CD74P04233 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.78□□□□□ -0.2
CD74P04233 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CD74P04233 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD74P04233 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms