Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD3O95983 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 AC138035.3-201ENST00000622706 2791 ntBASIC18.81■□□□□ 0.6
MBD3O95983 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD3O95983 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
MBD3O95983 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.81■□□□□ 0.6
MBD3O95983 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD3O95983 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
MBD3O95983 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.81■□□□□ 0.6
MBD3O95983 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD3O95983 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD3O95983 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 AC087481.3-201ENST00000602886 1894 ntBASIC18.8■□□□□ 0.6
MBD3O95983 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD3O95983 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.8■□□□□ 0.6
MBD3O95983 TPSP2-201ENST00000561760 610 ntBASIC18.8■□□□□ 0.6
MBD3O95983 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD3O95983 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
MBD3O95983 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD3O95983 AL009178.2-201ENST00000597278 2719 ntBASIC18.8■□□□□ 0.6
MBD3O95983 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
MBD3O95983 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.79■□□□□ 0.6
MBD3O95983 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 AC104076.2-201ENST00000448912 469 ntBASIC18.79■□□□□ 0.6
MBD3O95983 TOB2P1-201ENST00000469761 992 ntBASIC18.79■□□□□ 0.6
MBD3O95983 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 AL022326.1-202ENST00000641533 845 ntBASIC18.79■□□□□ 0.6
MBD3O95983 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD3O95983 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MBD3O95983 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD3O95983 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms