Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAPGEF3O95398 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 CROCCP2-202ENST00000412962 2773 ntBASIC24.08■■□□□ 1.45
RAPGEF3O95398 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAPGEF3O95398 AC004987.2-201ENST00000395959 1148 ntBASIC24.08■■□□□ 1.45
RAPGEF3O95398 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 MTX1P1-201ENST00000440904 838 ntBASIC24.08■■□□□ 1.45
RAPGEF3O95398 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAPGEF3O95398 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC24.08■■□□□ 1.45
RAPGEF3O95398 AC138951.2-201ENST00000623455 1161 ntBASIC24.08■■□□□ 1.45
RAPGEF3O95398 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RAPGEF3O95398 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC24.08■■□□□ 1.44
RAPGEF3O95398 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC24.08■■□□□ 1.44
RAPGEF3O95398 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RAPGEF3O95398 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RAPGEF3O95398 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAPGEF3O95398 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC24.07■■□□□ 1.44
RAPGEF3O95398 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 IGF1-203ENST00000392904 761 ntTSL 5 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 HOMER2P2-201ENST00000451621 847 ntBASIC24.06■■□□□ 1.44
RAPGEF3O95398 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 AL451050.2-201ENST00000606967 682 ntBASIC24.06■■□□□ 1.44
RAPGEF3O95398 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAPGEF3O95398 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.06■■□□□ 1.44
RAPGEF3O95398 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 ACKR1-201ENST00000368121 1240 ntBASIC24.05■■□□□ 1.44
RAPGEF3O95398 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 PTPA-217ENST00000434095 870 ntTSL 2 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RAPGEF3O95398 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAPGEF3O95398 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RAPGEF3O95398 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RAPGEF3O95398 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC24.04■■□□□ 1.44
RAPGEF3O95398 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms