Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 FOXO1B-201ENST00000504678 1527 ntBASIC17.28■□□□□ 0.36
RTN3O95197 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RTN3O95197 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 HLA-H-201ENST00000383620 1096 ntBASIC17.28■□□□□ 0.36
RTN3O95197 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.28■□□□□ 0.36
RTN3O95197 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN3O95197 RARRES2P9-201ENST00000565168 469 ntBASIC17.28■□□□□ 0.36
RTN3O95197 AC051619.7-201ENST00000568314 623 ntBASIC17.28■□□□□ 0.36
RTN3O95197 MIR6080-201ENST00000617359 66 ntBASIC17.28■□□□□ 0.36
RTN3O95197 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTN3O95197 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RTN3O95197 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
RTN3O95197 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RTN3O95197 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN3O95197 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
RTN3O95197 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 FAM220BP-201ENST00000377689 816 ntBASIC17.27■□□□□ 0.36
RTN3O95197 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.27■□□□□ 0.36
RTN3O95197 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTN3O95197 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN3O95197 HMGN1P19-201ENST00000436976 333 ntBASIC17.27■□□□□ 0.36
RTN3O95197 AC093724.1-201ENST00000448659 1027 ntBASIC17.27■□□□□ 0.36
RTN3O95197 KLF2P3-201ENST00000451977 1087 ntBASIC17.27■□□□□ 0.36
RTN3O95197 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN3O95197 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.27■□□□□ 0.36
RTN3O95197 AC078925.2-201ENST00000624013 1973 ntBASIC17.27■□□□□ 0.36
RTN3O95197 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.27■□□□□ 0.36
RTN3O95197 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RTN3O95197 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.27■□□□□ 0.35
RTN3O95197 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.27■□□□□ 0.35
RTN3O95197 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
RTN3O95197 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 AC008677.1-201ENST00000519230 1561 ntBASIC17.27■□□□□ 0.35
RTN3O95197 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RTN3O95197 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RTN3O95197 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.27■□□□□ 0.35
RTN3O95197 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTN3O95197 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 HYMAI-201ENST00000635591 3347 ntBASIC17.26■□□□□ 0.35
RTN3O95197 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN3O95197 C8orf49-201ENST00000525043 1968 ntBASIC17.26■□□□□ 0.35
RTN3O95197 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN3O95197 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RTN3O95197 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.26■□□□□ 0.35
RTN3O95197 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.26■□□□□ 0.35
RTN3O95197 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.26■□□□□ 0.35
RTN3O95197 AC018529.1-201ENST00000613063 361 ntBASIC17.26■□□□□ 0.35
RTN3O95197 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.26■□□□□ 0.35
RTN3O95197 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms