Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC068472.1-201ENST00000474589 881 ntBASIC14.29□□□□□ -0.12
UPK1BO75841 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 AC116562.2-201ENST00000507042 360 ntBASIC14.29□□□□□ -0.12
UPK1BO75841 BX088651.1-201ENST00000540551 451 ntBASIC14.29□□□□□ -0.12
UPK1BO75841 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.29□□□□□ -0.12
UPK1BO75841 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UPK1BO75841 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
UPK1BO75841 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UPK1BO75841 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UPK1BO75841 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.28□□□□□ -0.12
UPK1BO75841 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 ESRRAP1-201ENST00000400596 1257 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
UPK1BO75841 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 AC007967.3-201ENST00000434308 558 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 STK19B-204ENST00000512515 211 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 AC136759.1-202ENST00000530858 2194 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 AC010654.1-201ENST00000615722 808 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
UPK1BO75841 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 LINC01230-201ENST00000625222 3017 ntBASIC14.28□□□□□ -0.12
UPK1BO75841 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UPK1BO75841 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UPK1BO75841 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
UPK1BO75841 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
UPK1BO75841 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.27□□□□□ -0.12
UPK1BO75841 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.27□□□□□ -0.12
UPK1BO75841 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.27□□□□□ -0.12
UPK1BO75841 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.27□□□□□ -0.12
UPK1BO75841 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
UPK1BO75841 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.27□□□□□ -0.12
UPK1BO75841 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
UPK1BO75841 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.27□□□□□ -0.12
UPK1BO75841 AC092338.2-201ENST00000568827 1415 ntBASIC14.27□□□□□ -0.12
UPK1BO75841 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.27□□□□□ -0.12
UPK1BO75841 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
UPK1BO75841 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK1BO75841 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.27□□□□□ -0.13
UPK1BO75841 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.27□□□□□ -0.13
UPK1BO75841 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.27□□□□□ -0.13
UPK1BO75841 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.27□□□□□ -0.13
UPK1BO75841 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.27□□□□□ -0.13
UPK1BO75841 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.27□□□□□ -0.13
UPK1BO75841 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms