Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB3O75112 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.41■□□□□ 0.06
LDB3O75112 AC254562.1-201ENST00000417586 456 ntBASIC15.41■□□□□ 0.06
LDB3O75112 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 AC005237.2-201ENST00000434368 219 ntBASIC15.41■□□□□ 0.06
LDB3O75112 AP006288.1-201ENST00000446065 395 ntBASIC15.41■□□□□ 0.06
LDB3O75112 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.41■□□□□ 0.06
LDB3O75112 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 AC105233.2-201ENST00000523697 349 ntBASIC15.41■□□□□ 0.06
LDB3O75112 AF228730.5-201ENST00000530288 346 ntBASIC15.41■□□□□ 0.06
LDB3O75112 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LDB3O75112 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 SNHG9-202ENST00000564014 471 ntBASIC15.41■□□□□ 0.06
LDB3O75112 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.41■□□□□ 0.06
LDB3O75112 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
LDB3O75112 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.41■□□□□ 0.06
LDB3O75112 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LDB3O75112 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 U82695.1-201ENST00000635752 1889 ntBASIC15.4■□□□□ 0.06
LDB3O75112 FOXO1B-201ENST00000504678 1527 ntBASIC15.4■□□□□ 0.06
LDB3O75112 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.4■□□□□ 0.06
LDB3O75112 CNN2P11-201ENST00000429351 262 ntBASIC15.4■□□□□ 0.06
LDB3O75112 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 AP000842.3-202ENST00000569238 1080 ntBASIC15.4■□□□□ 0.06
LDB3O75112 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.4■□□□□ 0.06
LDB3O75112 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 AC073389.1-201ENST00000595595 795 ntBASIC15.4■□□□□ 0.06
LDB3O75112 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 AC004835.2-201ENST00000603762 682 ntBASIC15.4■□□□□ 0.06
LDB3O75112 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
LDB3O75112 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LDB3O75112 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LDB3O75112 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.4■□□□□ 0.06
LDB3O75112 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LDB3O75112 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LDB3O75112 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LDB3O75112 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LDB3O75112 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LDB3O75112 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LDB3O75112 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LDB3O75112 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms