Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCA5O60264 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.18■□□□□ 0.82
SMARCA5O60264 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SMARCA5O60264 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.18■□□□□ 0.82
SMARCA5O60264 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.18■□□□□ 0.82
SMARCA5O60264 UPF3AP3-201ENST00000420996 769 ntBASIC20.18■□□□□ 0.82
SMARCA5O60264 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCA5O60264 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCA5O60264 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.18■□□□□ 0.82
SMARCA5O60264 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMARCA5O60264 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SMARCA5O60264 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCA5O60264 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMARCA5O60264 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCA5O60264 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCA5O60264 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMARCA5O60264 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCA5O60264 YBX1P5-201ENST00000509441 847 ntBASIC20.17■□□□□ 0.82
SMARCA5O60264 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCA5O60264 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCA5O60264 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCA5O60264 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCA5O60264 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCA5O60264 AC105339.1-204ENST00000636249 355 ntBASIC20.17■□□□□ 0.82
SMARCA5O60264 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.17■□□□□ 0.82
SMARCA5O60264 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SMARCA5O60264 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SMARCA5O60264 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCA5O60264 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCA5O60264 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCA5O60264 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.16■□□□□ 0.82
SMARCA5O60264 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.16■□□□□ 0.82
SMARCA5O60264 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 DNAJB3-201ENST00000446806 729 ntBASIC20.16■□□□□ 0.82
SMARCA5O60264 AC069335.1-201ENST00000489972 472 ntBASIC20.16■□□□□ 0.82
SMARCA5O60264 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.16■□□□□ 0.82
SMARCA5O60264 AC073389.1-201ENST00000595595 795 ntBASIC20.16■□□□□ 0.82
SMARCA5O60264 AC022145.2-201ENST00000598203 171 ntBASIC20.16■□□□□ 0.82
SMARCA5O60264 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.16■□□□□ 0.82
SMARCA5O60264 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SMARCA5O60264 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMARCA5O60264 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.16■□□□□ 0.82
SMARCA5O60264 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCA5O60264 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms