Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.82■□□□□ 0.92
KCNQ3O43525 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNQ3O43525 AL365330.1-201ENST00000607459 531 ntBASIC20.82■□□□□ 0.92
KCNQ3O43525 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
KCNQ3O43525 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNQ3O43525 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
KCNQ3O43525 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ3O43525 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ3O43525 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNQ3O43525 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ3O43525 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNQ3O43525 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.81■□□□□ 0.92
KCNQ3O43525 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
KCNQ3O43525 INE1-201ENST00000456273 945 ntBASIC20.81■□□□□ 0.92
KCNQ3O43525 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 AC132938.2-201ENST00000579188 680 ntBASIC20.81■□□□□ 0.92
KCNQ3O43525 AC007431.3-201ENST00000623221 587 ntBASIC20.81■□□□□ 0.92
KCNQ3O43525 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 AL591163.1-201ENST00000641757 987 ntBASIC20.81■□□□□ 0.92
KCNQ3O43525 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNQ3O43525 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 AC079328.2-201ENST00000561241 3354 ntBASIC20.81■□□□□ 0.92
KCNQ3O43525 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KCNQ3O43525 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNQ3O43525 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNQ3O43525 CU639417.3-201ENST00000624240 1404 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.8■□□□□ 0.92
KCNQ3O43525 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
KCNQ3O43525 AZGP1P1-201ENST00000411909 902 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 POU5F1P6-201ENST00000466990 990 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNQ3O43525 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 CTBP2P3-201ENST00000585629 1255 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 MIR8072-201ENST00000614241 80 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KCNQ3O43525 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNQ3O43525 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KCNQ3O43525 PCDHA12-202ENST00000613593 2588 ntBASIC20.8■□□□□ 0.92
KCNQ3O43525 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KCNQ3O43525 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
KCNQ3O43525 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
KCNQ3O43525 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KCNQ3O43525 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 AC093004.1-201ENST00000508850 424 ntBASIC20.79■□□□□ 0.92
KCNQ3O43525 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNQ3O43525 TPRX2P-201ENST00000535362 881 ntBASIC20.79■□□□□ 0.92
KCNQ3O43525 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.79■□□□□ 0.92
KCNQ3O43525 LINC01115-203ENST00000606068 577 ntBASIC20.79■□□□□ 0.92
KCNQ3O43525 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
KCNQ3O43525 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
KCNQ3O43525 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNQ3O43525 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNQ3O43525 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.79■□□□□ 0.92
KCNQ3O43525 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KCNQ3O43525 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNQ3O43525 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms