Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.66■□□□□ 0.26
RIPK2O43353 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RIPK2O43353 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 HCG4-201ENST00000418983 998 ntBASIC16.66■□□□□ 0.26
RIPK2O43353 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.66■□□□□ 0.26
RIPK2O43353 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.66■□□□□ 0.26
RIPK2O43353 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 AC005412.3-201ENST00000580309 715 ntBASIC16.66■□□□□ 0.26
RIPK2O43353 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RIPK2O43353 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RIPK2O43353 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RIPK2O43353 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RIPK2O43353 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 AC138035.3-201ENST00000622706 2791 ntBASIC16.65■□□□□ 0.26
RIPK2O43353 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.65■□□□□ 0.26
RIPK2O43353 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.65■□□□□ 0.26
RIPK2O43353 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.65■□□□□ 0.26
RIPK2O43353 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.65■□□□□ 0.26
RIPK2O43353 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.65■□□□□ 0.26
RIPK2O43353 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.65■□□□□ 0.26
RIPK2O43353 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RIPK2O43353 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 U82695.1-201ENST00000635752 1889 ntBASIC16.65■□□□□ 0.26
RIPK2O43353 CICP13-201ENST00000422015 2789 ntBASIC16.65■□□□□ 0.26
RIPK2O43353 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.65■□□□□ 0.26
RIPK2O43353 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RIPK2O43353 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIPK2O43353 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RIPK2O43353 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
RIPK2O43353 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RIPK2O43353 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms