Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.47■□□□□ 0.39
O00370 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.47■□□□□ 0.39
O00370 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
O00370 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.47■□□□□ 0.39
O00370 AC093724.1-201ENST00000448659 1027 ntBASIC17.47■□□□□ 0.39
O00370 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
O00370 POU5F1P6-201ENST00000466990 990 ntBASIC17.47■□□□□ 0.39
O00370 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
O00370 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 AL138918.1-201ENST00000568306 659 ntBASIC17.47■□□□□ 0.39
O00370 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.47■□□□□ 0.39
O00370 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.47■□□□□ 0.39
O00370 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.47■□□□□ 0.39
O00370 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
O00370 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
O00370 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
O00370 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
O00370 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
O00370 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
O00370 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
O00370 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
O00370 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
O00370 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
O00370 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
O00370 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
O00370 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 AC079140.1-201ENST00000508039 487 ntBASIC17.46■□□□□ 0.39
O00370 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
O00370 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.46■□□□□ 0.39
O00370 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
O00370 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.46■□□□□ 0.39
O00370 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.46■□□□□ 0.39
O00370 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.46■□□□□ 0.39
O00370 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
O00370 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.46■□□□□ 0.39
O00370 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
O00370 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
O00370 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
O00370 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
O00370 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
O00370 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
O00370 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.45■□□□□ 0.38
O00370 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
O00370 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.45■□□□□ 0.38
O00370 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
O00370 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
O00370 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.45■□□□□ 0.38
O00370 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
O00370 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.45■□□□□ 0.38
O00370 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms