Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.09■□□□□ 0.17
CDC7O00311 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 AL078644.1-201ENST00000609881 752 ntBASIC16.09■□□□□ 0.17
CDC7O00311 AC120114.3-201ENST00000611923 658 ntBASIC16.09■□□□□ 0.17
CDC7O00311 BX640515.1-201ENST00000617215 977 ntBASIC16.09■□□□□ 0.17
CDC7O00311 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 U82695.1-201ENST00000635752 1889 ntBASIC16.09■□□□□ 0.17
CDC7O00311 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDC7O00311 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDC7O00311 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC7O00311 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 AL162727.3-201ENST00000635661 2787 ntBASIC16.09■□□□□ 0.17
CDC7O00311 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CDC7O00311 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.08■□□□□ 0.17
CDC7O00311 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC7O00311 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC7O00311 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.08■□□□□ 0.17
CDC7O00311 CDC14C-201ENST00000428251 1719 ntBASIC16.08■□□□□ 0.17
CDC7O00311 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.17
CDC7O00311 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC7O00311 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.08■□□□□ 0.17
CDC7O00311 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC7O00311 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDC7O00311 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 AC093724.1-201ENST00000448659 1027 ntBASIC16.08■□□□□ 0.16
CDC7O00311 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 KRT18P34-201ENST00000488218 1270 ntBASIC16.08■□□□□ 0.16
CDC7O00311 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
CDC7O00311 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDC7O00311 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 AC092865.6-201ENST00000642101 219 ntBASIC16.08■□□□□ 0.16
CDC7O00311 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 ZNF259P1-201ENST00000407656 1365 ntBASIC16.08■□□□□ 0.16
CDC7O00311 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.08■□□□□ 0.16
CDC7O00311 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDC7O00311 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.08■□□□□ 0.16
CDC7O00311 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 LINC02447-202ENST00000501888 2146 ntBASIC16.07■□□□□ 0.16
CDC7O00311 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDC7O00311 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.07■□□□□ 0.16
CDC7O00311 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.07■□□□□ 0.16
CDC7O00311 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.07■□□□□ 0.16
CDC7O00311 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CDC7O00311 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.07■□□□□ 0.16
CDC7O00311 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDC7O00311 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
CDC7O00311 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.07■□□□□ 0.16
CDC7O00311 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDC7O00311 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CDC7O00311 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDC7O00311 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms