Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 REXO1L8P-201ENST00000604378 1897 ntBASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ESRRAP1-201ENST00000400596 1257 ntBASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 AC116562.2-201ENST00000507042 360 ntBASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 LINC01144-201ENST00000626198 1710 ntBASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC10.4□□□□□ -0.74
TMEM256-PLSCR3K7ERE1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC10.4□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC010460.3-201ENST00000511359 1579 ntBASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC013726.1-201ENST00000563747 2285 ntBASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL355802.2-201ENST00000402069 882 ntBASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NUDT16P1-203ENST00000513809 620 ntBASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms