Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 LINC01225-203ENST00000563550 1244 ntBASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC105339.1-204ENST00000636249 355 ntBASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC196A0A1B0GTZ2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 MIR346-201ENST00000362234 95 ntBASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 SPTSSB-204ENST00000617024 1292 ntBASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.04■□□□□ 0.64
CCDC196A0A1B0GTZ2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL592309.1-201ENST00000443127 649 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL513210.1-201ENST00000629608 234 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AC084121.4-201ENST00000641598 221 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AF228730.8-201ENST00000642140 221 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 AL513523.2-202ENST00000427283 2040 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 DOC2GP-204ENST00000639052 2548 ntBASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC196A0A1B0GTZ2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC196A0A1B0GTZ2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms