Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 PCGF3-213ENST00000620529 1899 ntBASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HCFC2Q9Y5Z7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 RN7SL399P-201ENST00000471648 279 ntBASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HCFC2Q9Y5Z7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 AC005622.1-201ENST00000636801 1703 ntBASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HCFC2Q9Y5Z7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 FAM8A2P-201ENST00000528813 1142 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AC233724.13-201ENST00000598383 410 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AL365330.1-201ENST00000607459 531 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AL391069.4-201ENST00000609583 481 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 Z97205.2-201ENST00000564697 1639 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AL603756.1-201ENST00000606511 2163 ntBASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HCFC2Q9Y5Z7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 AC006538.1-201ENST00000567905 1585 ntBASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HCFC2Q9Y5Z7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms