Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 AL121723.1-201ENST00000445194 1519 ntBASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 ZBTB45P2-201ENST00000452245 1531 ntBASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 CNN2P8-201ENST00000421872 913 ntBASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 RPL13AP20-201ENST00000459725 609 ntBASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 RPL13AP25-201ENST00000484130 612 ntBASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC24.24■■□□□ 1.47
CDC42BPBQ9Y5S2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 AC097359.3-201ENST00000603982 1210 ntBASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPBQ9Y5S2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 AC006033.1-201ENST00000440505 426 ntBASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 KRT18P43-201ENST00000469825 1281 ntBASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CDC42BPBQ9Y5S2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 ENPP7P5-201ENST00000541031 1031 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 ABBA01031663.1-201ENST00000635630 790 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 ZBTB12BP-201ENST00000314232 1122 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AC016694.1-201ENST00000434179 700 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 GOLGA2P4-201ENST00000441462 777 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AC093433.1-201ENST00000458048 571 ntBASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPBQ9Y5S2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms