Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL031284.1-201ENST00000419297 478 ntBASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 AC117500.6-201ENST00000624871 588 ntBASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RHBDD3Q9Y3P4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC129492.6-201ENST00000611383 1305 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC007326.2-201ENST00000624224 7579 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC108073.2-201ENST00000464002 357 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC004790.2-201ENST00000623588 572 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AL353732.1-201ENST00000569618 1459 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 AL031731.1-201ENST00000642131 2094 ntBASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
RHBDD3Q9Y3P4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MRPL3P1-201ENST00000400109 1033 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MRPL20P1-201ENST00000400819 433 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 AC005412.3-201ENST00000580309 715 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms