Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AP3S2-216ENST00000617003 1561 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 HLA-H-201ENST00000383620 1096 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AC061975.2-201ENST00000581722 295 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 MIR4321-201ENST00000592276 80 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AC079781.4-201ENST00000641908 219 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 DOC2GP-204ENST00000639052 2548 ntBASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHA4Q9UN74 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AC024267.1-201ENST00000582320 895 ntBASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AP001160.2-201ENST00000596071 487 ntBASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AC006538.3-201ENST00000612495 578 ntBASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHA4Q9UN74 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 RNA5SP410-201ENST00000516285 106 ntBASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 ALG1L8P-201ENST00000533887 760 ntBASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 RARRES2P9-201ENST00000565168 469 ntBASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 AL391005.1-201ENST00000623953 2435 ntBASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHA4Q9UN74 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 RBPMS2P1-201ENST00000437762 623 ntBASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHA4Q9UN74 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms