Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 AP005019.2-201ENST00000615104 511 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 FO393412.1-201ENST00000619841 382 ntBASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RIMBP3Q9UFD9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 AL133267.1-201ENST00000398220 340 ntBASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 REEP5-205ENST00000504247 480 ntTSL 5 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 ETV2-207ENST00000619399 994 ntTSL 5 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC25.29■■□□□ 1.64
RIMBP3Q9UFD9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 AC006335.1-201ENST00000445200 547 ntBASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 AC026410.1-201ENST00000507366 1101 ntBASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC25.28■■□□□ 1.64
RIMBP3Q9UFD9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 AC018695.6-201ENST00000614011 534 ntBASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC25.27■■□□□ 1.64
RIMBP3Q9UFD9 AC012362.1-201ENST00000434906 739 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 MARK2P5-201ENST00000507649 634 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 MIR4754-201ENST00000582477 89 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 AC007881.3-201ENST00000608897 607 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TUBB8P12-201ENST00000308911 1335 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TUBB7P-202ENST00000428444 1305 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 TUBB8P7-204ENST00000567960 1332 ntBASIC25.26■■□□□ 1.63
RIMBP3Q9UFD9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 ISCA2P1-201ENST00000425548 448 ntBASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 KRT18P43-201ENST00000469825 1281 ntBASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 SAMD11P1-201ENST00000571429 661 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms