Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 LINC00895-201ENST00000629028 1637 ntBASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AC142381.1-201ENST00000426099 345 ntBASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AC021097.1-201ENST00000607902 574 ntBASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HDAC6Q9UBN7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 AC008761.3-201ENST00000624803 892 ntBASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HDAC6Q9UBN7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 AC026691.1-201ENST00000602502 2017 ntBASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HDAC6Q9UBN7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms