Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 GGT4P-201ENST00000623672 1708 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 WASH6P-202ENST00000359512 1437 ntBASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPARGC1AQ9UBK2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 GPAA1P2-202ENST00000606848 1787 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AL355306.1-201ENST00000415580 579 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 ADH5P3-201ENST00000433842 1137 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 RARRES2P8-201ENST00000566335 367 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AC020765.3-201ENST00000613051 740 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AKAP8P1-201ENST00000434743 1349 ntBASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
PPARGC1AQ9UBK2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AL662844.4-201ENST00000606367 2838 ntBASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AL671277.1-201ENST00000429656 993 ntBASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms