Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 AL358472.5-202ENST00000641448 1267 ntBASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRIT1Q9P2V4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 AC105020.1-201ENST00000435356 2205 ntBASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 SPDYE22P-201ENST00000582158 798 ntBASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRIT1Q9P2V4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 RN7SL618P-201ENST00000477850 296 ntBASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 AC025048.6-201ENST00000634326 1161 ntBASIC15.77■□□□□ 0.12
LRIT1Q9P2V4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
LRIT1Q9P2V4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRIT1Q9P2V4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms