Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PARPBPQ9NWS1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 YBX1P5-201ENST00000509441 847 ntBASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AC023511.2-201ENST00000618803 211 ntBASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AC079781.4-201ENST00000641908 219 ntBASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 RNF216P1-203ENST00000404404 2427 ntBASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PARPBPQ9NWS1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 GPAA1P2-202ENST00000606848 1787 ntBASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AC211486.1-202ENST00000416371 468 ntBASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AC211476.1-201ENST00000503899 468 ntBASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 HLA-A-202ENST00000376806 1854 ntBASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.71□□□□□ -0.05
PARPBPQ9NWS1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
PARPBPQ9NWS1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PARPBPQ9NWS1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PARPBPQ9NWS1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms