Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AL138918.1-201ENST00000568306 659 ntBASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 LINC01144-201ENST00000626198 1710 ntBASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 CICP6-201ENST00000457191 2729 ntBASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CUEDC1Q9NWM3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AC243562.1-201ENST00000560672 389 ntBASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AC026120.1-201ENST00000611536 926 ntBASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CUEDC1Q9NWM3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CUEDC1Q9NWM3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms