Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 MIR4321-201ENST00000592276 80 ntBASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC027612.4-201ENST00000605371 583 ntBASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC009093.7-201ENST00000623853 1223 ntBASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AL391005.1-201ENST00000623953 2435 ntBASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 HLA-H-201ENST00000383620 1096 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AC023141.5-201ENST00000458585 616 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AC061975.2-201ENST00000581722 295 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AC026691.1-201ENST00000602502 2017 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 AP3S2-216ENST00000617003 1561 ntBASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ECHDC1Q9NTX5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 AC079781.4-201ENST00000641908 219 ntBASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.9■□□□□ 0.78
ECHDC1Q9NTX5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.89■□□□□ 0.78
ECHDC1Q9NTX5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ECHDC1Q9NTX5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 RARRES2P9-201ENST00000565168 469 ntBASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 AC024267.1-201ENST00000582320 895 ntBASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 AP001160.2-201ENST00000596071 487 ntBASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 AC006538.3-201ENST00000612495 578 ntBASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.89■□□□□ 0.77
ECHDC1Q9NTX5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms