Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 FGFR3P6-201ENST00000457012 610 ntBASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 AC008608.2-201ENST00000606089 416 ntBASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ARMC10P1-201ENST00000313754 855 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ELK2BP-201ENST00000415014 1224 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 FAM210CP-201ENST00000445714 574 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 AL121772.3-201ENST00000610840 674 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 U82695.1-201ENST00000635752 1889 ntBASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.32□□□□□ -0.6
CDC42SE2Q9NRR3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CDC42SE2Q9NRR3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms