Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AC079781.3-201ENST00000449110 356 ntBASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AL645728.2-201ENST00000641974 660 ntBASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NRIP3Q9NQ35 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 PMS2P4-201ENST00000412466 1052 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 CDC14C-201ENST00000428251 1719 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AL160237.2-201ENST00000556165 472 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AC104640.1-201ENST00000562617 2109 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AL031432.2-201ENST00000566714 459 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 AL928711.1-201ENST00000570165 459 ntBASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NRIP3Q9NQ35 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 MIR648-201ENST00000385046 94 ntBASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 AC092910.1-201ENST00000482027 1129 ntBASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 AC108751.1-201ENST00000490852 363 ntBASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 AL031055.1-201ENST00000606362 631 ntBASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.78□□□□□ -0.04
NRIP3Q9NQ35 AL773604.1-201ENST00000617417 272 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms