Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 POU5F1P6-201ENST00000466990 990 ntBASIC18.2■□□□□ 0.5
VTA1Q9NP79 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 IGHV3-71-201ENST00000523324 359 ntBASIC18.2■□□□□ 0.5
VTA1Q9NP79 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AC123567.1-201ENST00000548294 1261 ntBASIC18.2■□□□□ 0.5
VTA1Q9NP79 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AC093726.1-201ENST00000608064 963 ntBASIC18.2■□□□□ 0.5
VTA1Q9NP79 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.2■□□□□ 0.5
VTA1Q9NP79 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VTA1Q9NP79 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 HLA-A-202ENST00000376806 1854 ntBASIC18.19■□□□□ 0.5
VTA1Q9NP79 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 ELK1P1-201ENST00000485699 580 ntBASIC18.19■□□□□ 0.5
VTA1Q9NP79 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 TIMM17BP1-201ENST00000545713 516 ntBASIC18.19■□□□□ 0.5
VTA1Q9NP79 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 AL162274.1-201ENST00000617191 1098 ntBASIC18.19■□□□□ 0.5
VTA1Q9NP79 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VTA1Q9NP79 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VTA1Q9NP79 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VTA1Q9NP79 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VTA1Q9NP79 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 FZD10-202ENST00000539839 3282 ntBASIC18.17■□□□□ 0.5
VTA1Q9NP79 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 HILS1-202ENST00000545329 423 ntBASIC18.17■□□□□ 0.5
VTA1Q9NP79 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AC106886.1-201ENST00000568660 600 ntBASIC18.17■□□□□ 0.5
VTA1Q9NP79 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms