Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 AC005252.2-201ENST00000624630 1141 ntBASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 AC008687.7-202ENST00000637404 953 ntBASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF541Q9H0D2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 C1QBPP1-201ENST00000400117 770 ntBASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 ACTG1P17-201ENST00000558391 1119 ntBASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AL022328.3-201ENST00000607943 679 ntBASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF541Q9H0D2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ZNF541Q9H0D2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 KRT18P64-201ENST00000434946 1219 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 TARDBPP1-201ENST00000442013 1203 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 VDAC1P7-201ENST00000462417 847 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 AP001258.2-201ENST00000529891 490 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 AC079328.1-201ENST00000560358 952 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 AC009486.1-201ENST00000569860 813 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 AL133373.2-201ENST00000623187 2828 ntBASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF541Q9H0D2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF541Q9H0D2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms