Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LINC01225-203ENST00000563550 1244 ntBASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AP000842.3-202ENST00000569238 1080 ntBASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLR1EQ9GZS1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 MIR346-201ENST00000362234 95 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC142381.1-201ENST00000426099 345 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AP006288.1-201ENST00000446065 395 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC069335.1-201ENST00000489972 472 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC098859.1-201ENST00000502915 1238 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 UXT-AS1-201ENST00000590504 1525 ntBASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLR1EQ9GZS1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 AC004461.1-201ENST00000412461 403 ntBASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 AC254562.1-201ENST00000417586 456 ntBASIC16.59■□□□□ 0.25
POLR1EQ9GZS1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms