Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC132008.2-207ENST00000454517 770 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC006557.2-201ENST00000592985 1240 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 IGHV3OR16-7-201ENST00000604106 360 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC008608.2-201ENST00000606089 416 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 AC060834.1-201ENST00000443027 2032 ntBASIC9.85□□□□□ -0.83
LIMD2Q9BT23 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC9.85□□□□□ -0.83
LIMD2Q9BT23 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 SLC25A1P3-201ENST00000395415 828 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 SAPCD2P3-201ENST00000455031 850 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 KRT18P31-201ENST00000506277 1292 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 MTDHP3-201ENST00000594186 672 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AP001269.4-201ENST00000609611 512 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AC148477.5-201ENST00000625164 1645 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PAN3-AS1-201ENST00000563843 1351 ntBASIC9.84□□□□□ -0.83
LIMD2Q9BT23 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LIMD2Q9BT23 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms