Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.77■□□□□ 0.12
CDC6Q99741 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.77■□□□□ 0.12
CDC6Q99741 AL033527.5-201ENST00000641382 801 ntBASIC15.77■□□□□ 0.12
CDC6Q99741 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDC6Q99741 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC6Q99741 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC6Q99741 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDC6Q99741 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.77■□□□□ 0.11
CDC6Q99741 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDC6Q99741 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CDC6Q99741 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC6Q99741 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDC6Q99741 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.76■□□□□ 0.11
CDC6Q99741 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
CDC6Q99741 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.76■□□□□ 0.11
CDC6Q99741 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC6Q99741 AL139010.1-201ENST00000454878 894 ntBASIC15.76■□□□□ 0.11
CDC6Q99741 AC104989.1-201ENST00000519711 778 ntBASIC15.76■□□□□ 0.11
CDC6Q99741 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CDC6Q99741 AC061975.2-201ENST00000581722 295 ntBASIC15.76■□□□□ 0.11
CDC6Q99741 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDC6Q99741 AL589702.1-201ENST00000641229 1509 ntBASIC15.76■□□□□ 0.11
CDC6Q99741 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.76■□□□□ 0.11
CDC6Q99741 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDC6Q99741 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDC6Q99741 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.76■□□□□ 0.11
CDC6Q99741 AL671710.1-201ENST00000610245 2349 ntBASIC15.76■□□□□ 0.11
CDC6Q99741 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CDC6Q99741 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDC6Q99741 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC6Q99741 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.75■□□□□ 0.11
CDC6Q99741 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 AC092337.1-201ENST00000568699 1129 ntBASIC15.75■□□□□ 0.11
CDC6Q99741 MIR4259-201ENST00000584466 101 ntBASIC15.75■□□□□ 0.11
CDC6Q99741 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDC6Q99741 WFDC1-204ENST00000613603 549 ntBASIC15.75■□□□□ 0.11
CDC6Q99741 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
CDC6Q99741 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.75■□□□□ 0.11
CDC6Q99741 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDC6Q99741 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.75■□□□□ 0.11
CDC6Q99741 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.75■□□□□ 0.11
CDC6Q99741 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDC6Q99741 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDC6Q99741 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDC6Q99741 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDC6Q99741 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDC6Q99741 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms