Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 AC100757.3-201ENST00000622361 1406 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 AC236430.1-201ENST00000402231 743 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 AL035633.1-201ENST00000406139 838 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 HLA-V-204ENST00000476601 1289 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TERF1P3-201ENST00000505638 1227 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 AL138828.2-201ENST00000615812 383 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 AL590560.3-201ENST00000623350 461 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CETN4P-206ENST00000642099 2168 ntBASIC15.86■□□□□ 0.13
SLC38A3Q99624 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC38A3Q99624 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC38A3Q99624 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 GGT4P-201ENST00000623672 1708 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 PCGF3-213ENST00000620529 1899 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 COX20P2-201ENST00000452636 358 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 UGT1A2P-201ENST00000454886 866 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 AC105021.1-202ENST00000570572 669 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC38A3Q99624 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 RN7SL828P-201ENST00000607615 303 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 AL589739.1-201ENST00000607720 493 ntBASIC15.85■□□□□ 0.13
SLC38A3Q99624 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC38A3Q99624 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms