Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 BCAS2P2-201ENST00000425064 674 ntBASIC4.85□□□□□ -1.63
HMCN1Q96RW7 HIST1H2APS2-201ENST00000454426 370 ntBASIC4.85□□□□□ -1.63
HMCN1Q96RW7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 AL671710.1-201ENST00000610245 2349 ntBASIC4.85□□□□□ -1.63
HMCN1Q96RW7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HMCN1Q96RW7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 USP40-206ENST00000443711 628 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 MIR4492-201ENST00000581627 80 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TOP3BP1-201ENST00000420768 1380 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC106047.2-201ENST00000511723 743 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AP003398.1-201ENST00000531124 318 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 MIR5001-201ENST00000580185 100 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC012073.1-201ENST00000606114 1108 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 HMGB1P24-201ENST00000611897 328 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AP000997.3-201ENST00000623333 2250 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AL138688.1-201ENST00000624851 1594 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC093433.1-201ENST00000458048 571 ntBASIC4.84□□□□□ -1.63
HMCN1Q96RW7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms