Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GAFA1Q96PS6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 RPS8P6-201ENST00000426177 609 ntBASIC13.61□□□□□ -0.23
GAFA1Q96PS6 DNAJB3-202ENST00000449667 1266 ntBASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 SNHG9-202ENST00000564014 471 ntBASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 AL596087.1-201ENST00000400979 1969 ntBASIC13.61□□□□□ -0.23
GAFA1Q96PS6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GAFA1Q96PS6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 FAM58DP-201ENST00000428076 619 ntBASIC13.6□□□□□ -0.23
GAFA1Q96PS6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms