Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 MST1L-201ENST00000442552 2185 ntBASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PDLIM5Q96HC4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AL513477.1-201ENST00000602865 2407 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 MCCD1P2-201ENST00000423228 335 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC098859.1-201ENST00000502915 1238 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 FAM86C2P-203ENST00000528684 1004 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC103702.1-201ENST00000548801 2630 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC040169.1-201ENST00000565382 521 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AC008741.2-201ENST00000612792 3115 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 AP005117.1-202ENST00000581724 1908 ntBASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDLIM5Q96HC4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AL671277.1-201ENST00000429656 993 ntBASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AC105233.2-201ENST00000523697 349 ntBASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AF228730.5-201ENST00000530288 346 ntBASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AL138918.1-201ENST00000568306 659 ntBASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AC091812.2-201ENST00000619081 385 ntBASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
PDLIM5Q96HC4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDLIM5Q96HC4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms