Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AC007326.2-201ENST00000624224 7579 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AC005622.1-201ENST00000636801 1703 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AC109635.5-201ENST00000533593 962 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AC145285.3-201ENST00000564603 959 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 U82695.1-201ENST00000635752 1889 ntBASIC14.39□□□□□ -0.11
SPTSSAQ969W0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPTSSAQ969W0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.38□□□□□ -0.11
SPTSSAQ969W0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 KRT18P34-201ENST00000488218 1270 ntBASIC14.38□□□□□ -0.11
SPTSSAQ969W0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 AC064836.3-201ENST00000607928 673 ntBASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms