Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 BCAR1-209ENST00000546196 1340 ntBASIC15.17■□□□□ 0.02
CNOT9Q92600 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT9Q92600 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT9Q92600 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT9Q92600 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT9Q92600 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT9Q92600 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CNOT9Q92600 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT9Q92600 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT9Q92600 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT9Q92600 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.16■□□□□ 0.02
CNOT9Q92600 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.16■□□□□ 0.02
CNOT9Q92600 MIR3909-201ENST00000579518 119 ntBASIC15.16■□□□□ 0.02
CNOT9Q92600 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT9Q92600 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT9Q92600 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT9Q92600 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.16■□□□□ 0.02
CNOT9Q92600 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.16■□□□□ 0.02
CNOT9Q92600 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CNOT9Q92600 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT9Q92600 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CNOT9Q92600 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CNOT9Q92600 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CNOT9Q92600 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.15■□□□□ 0.02
CNOT9Q92600 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.15■□□□□ 0.02
CNOT9Q92600 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.15■□□□□ 0.02
CNOT9Q92600 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 HYMAI-201ENST00000635591 3347 ntBASIC15.15■□□□□ 0.02
CNOT9Q92600 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CNOT9Q92600 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.15■□□□□ 0.02
CNOT9Q92600 AC005622.1-201ENST00000636801 1703 ntBASIC15.14■□□□□ 0.01
CNOT9Q92600 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CNOT9Q92600 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CNOT9Q92600 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNOT9Q92600 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.14■□□□□ 0.01
CNOT9Q92600 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.14■□□□□ 0.01
CNOT9Q92600 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CNOT9Q92600 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT9Q92600 KRT19P2-202ENST00000557173 1012 ntBASIC15.14■□□□□ 0.01
CNOT9Q92600 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT9Q92600 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.14■□□□□ 0.01
CNOT9Q92600 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.14■□□□□ 0.01
CNOT9Q92600 AL009183.1-201ENST00000603760 355 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms